Ok, so what you need to do now is verify everything is working correctly. You need to go into a question of each type and verify that you can edit them. That will show you that the data has transposed to the new table correctly.
Also check your tool monitor as well.
Once you have verified that the data has come into the new table (you can also open the new tables and verify the data is there but I recommend checking functionality too), you can delete the old ones.
For any ones that have not created a new table (off the top of my head I see ddmarker_drops) just rename the old table back to its original name. (This might not have been created because you don't have any questions of this type but occasionally the table will not recreate properly so this method ensures that you don't lose any of your questions)