Hello Howard... thanks for you quick assistance..
Well...
We did all written about the upgrade process:
1 - Backup the site/Database
2 - Move all content to a copy location
3- Upload the new version of Moodle
4- copy the config file from the moved to the actual site.
5 - Start the install/upgrade process...
We did it about a month ago.. but until now we noticed the errors...
I will try the debug mode... and see what it says...
I will handle to you, maybe you can give an answer...
---- Note
The issues about the unseen delete confirmation page/warnings are related to the adaptable theme...
The only problem we do not know about is on pending activities error..
Thanks again...